Changelog#

All notable changes to this project will be documented in this file.

The format is based on Keep a Changelog and this project adheres to Semantic Versioning.

Unreleased#

v0.1.2 - 2024-11-05#

Added#

  • Sketcher.sketch_paired to sketch paired reads.

  • SampleSketch.kmer_counts to access the k-mer counts of a sketch as a Python dict.

  • deduplicated and fpr parameters to Sketcher to control read deduplication.

  • Package recipe on the Arch User Repository.

v0.1.1 - 2024-10-25#

Added#

  • Type annotations to pysylph module.

  • Sphinx documentation with API reference hosted on ReadTheDocs.

Fixed#

  • Add missing ProfileResult class to the pysylph.lib module.

Changed#

  • Implement reading sequence data using the buffer-protocol in Sketcher methods.

v0.1.0 - 2024-10-25#

Initial release.